Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888166.1_cds_XP_016442717.1_37951
CDS Infomation

[gene=LOC107768127] [db_xref=GeneID:107768127] [protein=peroxidase 57-like] [protein_id=XP_016442717.1] [location=join(71971..72723,73394..74140)] [gbkey=CDS]
Sequence

ATGGCAGCGAAGGCAAGAATTTTTGCAGGTCTTTTTCTTATTTGCACGATTCTCCCTTCT
CTGTCCTCAGCATTTGCAGATCATCTTCCTGAAGTTCTCCTAGCGAACAATTCTGATAAA
AATATTGATGTGCCAATCCATGTTAATAATGTTGCTCATGTCAGCGACGACGATGACACA
ATTTTTGAACTAGATGGTAAAAAGGGGAAAAAACTGAAAAGGGCATTGAAGAAAAGGGCA
CAAAAACAGCATGATCTGTGGGAAAAAATTCTTGATCATGACATCATTGAAGAAAGCCAA
CCTGAAGAAGATGCTGCACCTGTAACTCCAACACCTGTGCCTGTCAATCCAACCCCAACA
CCCGTACCTGTTGATCCAACACCTAATCCTGTGCCTATTAATCCAACGCCTAATCCCGTG
ACCGTTAATCCAACACCTACGAATGTGCCTGCAGGATATCCAGGAGCAACTCTACCACCT
GTGACAATAGGATATGGGGGTGCACCTCAAACACCTAATCCATCAGCCACACAAACACCT
GTGCCTGTACAGCCAGCTCCAGGGCAAAAACATCCAACACCAGAAGAAATTAAAGAGCTA
CGTAAACATGCTAGATTGAAAGTGGGATTTTACGATGAAATTTGCCCAAAAGCTGAGAAG
ATTATTAAGGATGGCATGATCAGGGCTTTTGGGAATGATTCCAGCATTGCTGCTGCGATT
CCCCGCCTTCTATTGCATGATTGCTTTGTCAATGGATGTGATGCATCACTATTGCTAGAC
CAGACACCAAGTGGGGCAAGGGTAGAGAAGCTCGCCAACTCCAATGGACCAACAGTTAGG
GGATTTGATCTCATTGACCAGATCAAGGCTGAGCTTGAGGCAGAATGCCCCCGCGTAGTC
TCGTGCACAGATCTTTTGGTATATTTATCAAGGGATGCCTTTGTTGTATCCGGTGTCCCT
CACTATGACGTGCCTGGTGGACGTCGTGATGGAATGGAATCCCTTGAAGCAAATGTTCAT
GGCAACCTCCCACTTCCTGATAATACAGTGGATACGTTGATTGACCTCTTCAAAAGGAAA
GGCCTGAATGAAGAGGATTTGGCAGTTTTAATTGGTGCCCACTCCATTGGAGTAGCACAC
TGTTTCAGCTTCCTTTACCGATTGGATAATCCTCAGAAGGCGGCCATGGTAGATCCAAGG
CTCGCTGGAGTTATGAGATTCACATGTACCAACCAAATGAATACTTTGGCTTTTGATACC
ACCACACAGTACAAGATGGATTCTATTTACTACAAGCAGCTGGCTGAAAAAAGAGGACTA
CTTGAATCAGATGTGCTTTTGAGTGAAGATCCCAGAACAAAGGACTATATCCAAAAGTTT
GGTGATGACCAATCGGGATGGTTCAACAAGTTGGGCAAGGCCATGAACAAGTTGGCTTCA
ATGCAAGTGCTCACTGGTGACCAGGGGCAGATCAGGAAACAGTGCAGGGCTGTTAACTGA

Peptide Sequence

PEP ID

XP_016442717.1
PEP Infomation

PREDICTED: peroxidase 57-like [Nicotiana tabacum]
Sequence

MAAKARIFAGLFLICTILPSLSSAFADHLPEVLLANNSDKNIDVPIHVNNVAHVSDDDDT
IFELDGKKGKKLKRALKKRAQKQHDLWEKILDHDIIEESQPEEDAAPVTPTPVPVNPTPT
PVPVDPTPNPVPINPTPNPVTVNPTPTNVPAGYPGATLPPVTIGYGGAPQTPNPSATQTP
VPVQPAPGQKHPTPEEIKELRKHARLKVGFYDEICPKAEKIIKDGMIRAFGNDSSIAAAI
PRLLLHDCFVNGCDASLLLDQTPSGARVEKLANSNGPTVRGFDLIDQIKAELEAECPRVV
SCTDLLVYLSRDAFVVSGVPHYDVPGGRRDGMESLEANVHGNLPLPDNTVDTLIDLFKRK
GLNEEDLAVLIGAHSIGVAHCFSFLYRLDNPQKAAMVDPRLAGVMRFTCTNQMNTLAFDT
TTQYKMDSIYYKQLAEKRGLLESDVLLSEDPRTKDYIQKFGDDQSGWFNKLGKAMNKLAS
MQVLTGDQGQIRKQCRAVN

Transcript Sequence

Gene sequence data has not been registered.